%global packname SummarizedExperiment %global packver 1.6.3 Name: R-%{packname} Version: %{packver} Release: 1%{?dist} Source0: http://www.bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{packver}.tar.gz License: Artistic 2.0 URL: http://www.bioconductor.org/packages/release/bioc/html/%{packname}.html Group: Applications/Engineering Summary: SummarizedExperiment container BuildRequires: R-devel >= 3.2.0, tetex-latex, R-methods, R-GenomicRanges >= 1.27.22, R-Biobase BuildRequires: R-DelayedArray >= 0.1.9, R-utils, R-stats, R-tools, R-Matrix, R-BiocGenerics >= 0.15.3 BuildRequires: R-S4Vectors-devel >= 0.13.13, R-IRanges-devel >= 2.7.2, R-GenomeInfoDb >= 1.11.4 BuildArch: noarch Requires: R-core >= 3.2.0 Requires: R-methods, R-GenomicRanges >= 1.27.22, R-Biobase, R-DelayedArray >= 0.1.9 Requires: R-utils, R-stats, R-tools, R-Matrix, R-BiocGenerics >= 0.15.3, R-S4Vectors >= 0.13.13 Requires: R-IRanges >= 2.7.2, R-GenomeInfoDb >= 1.11.4 %description The SummarizedExperiment container contains one or more assays, each represented by a matrix-like object of numeric or other mode. The rows typically represent genomic ranges of interest and the columns represent samples. %prep %setup -q -c -n %{packname} %build %install mkdir -p $RPM_BUILD_ROOT%{_datadir}/R/library %{_bindir}/R CMD INSTALL -l $RPM_BUILD_ROOT%{_datadir}/R/library %{packname} test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) rm -rf $RPM_BUILD_ROOT%{_datadir}/R/library/R.css %check # Too many missing deps # %%{_bindir}/R CMD check %%{packname} %files %dir %{_datadir}/R/library/%{packname} %doc %{_datadir}/R/library/%{packname}/html %{_datadir}/R/library/%{packname}/DESCRIPTION %{_datadir}/R/library/%{packname}/INDEX %{_datadir}/R/library/%{packname}/NAMESPACE %{_datadir}/R/library/%{packname}/Meta %{_datadir}/R/library/%{packname}/R %{_datadir}/R/library/%{packname}/NEWS %{_datadir}/R/library/%{packname}/doc %{_datadir}/R/library/%{packname}/extdata %{_datadir}/R/library/%{packname}/help %{_datadir}/R/library/%{packname}/scripts %{_datadir}/R/library/%{packname}/unitTests %changelog * Wed May 31 2017 Tom Callaway - 1.6.3-1 - initial package